Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQSLAKQVIHQAVEVNAQDIYIIPKGDCYELYMRIDDERRFIDVFEFNRMASLISHFKFVAGMNVGEKRRSQLGSCDYELSEGRLVSLRLSSVGDYRGQESLVIRILYSGHQ--D--LKYWFDN-IKQM-KEVLGTRGLYLFSGPVGSGKTTLMYQLASEVFK-NKQIITIEDPVEIKNDKMLQLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSISGVYDRLIELGVNYQELENSLKLIAYQRLIGGGS-----------------------------------------LIDFETGNF------------------KKHSSDKWNRQVDILAEEGHISKKQAQVEKIIPQETTESSPTF |
| 1P9R Chain:A ((33-410)) | -IIKLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISL------AVDVRVSTMPSS-HGERVVMRLLDKNATRLDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQAMEKHIRATTPSIRDDGLDKVRQGITSLEEVMRGS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176966 for 2298 contacts (-77.0/contact) +
2D Compatibility (PS) -32513 + (NN) -8224 + (LL) 1280
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -233623.0 ( -101.66 by residue)
QMean score : 0.580
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