Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEKVFRDPVHTYIHVNNQVIYDLINTKEFQRLRRIKQTSTTSFTFHGAEHSRFSHCLGVYELARKVTEIFDEHYSDLWNKNESLLTMAAALLHDIGHGAYSHTFERLFNT--DHEAYTQEIITNPTTEINAILRKVAPDFPDKVASVI---NHSYPNKQVVQLISSQIDCDRMDYLLRDSYYTAASYGQFDLTRILRVIRPTDSGIAFARNGMHAVEDYIVSRFQMYMQVYFHPASRAMELLLQNLLKRARFLFDTHRDFFEQTSPNLIPFFTDQYDLQDYLALDDGVMNTYFQSWMQADDNILADLANRFINRKVFKSITFEESDKENLVKMKELVSQVGFDPDYYTGVHANFDLPYDVYRPEHSNPRTEIQIIQKNGQLAELSSLSPIVKALTGSNYGDQRFYFPKEMLTLDSLFSSTKEEFQSYITNEHLTLTKDNSHS |
| 2HEK Chain:A ((1-369)) | -MIKEFSDPLYGFVRVG-EAGLRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICESL--------KVKEKELVKLAGLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKE-TEIYEILKQDYSHEDIERLVRITLGKPEDEEEKLLSEIITGEFGSDRMDYLRRDAYFCGVSYGFFDYDRLISTLRVYENKVVVDESGLRALENFLISRYFMYVQVYFHKVVRILSIHLVEFLKKL-------------------ISQEDFTDINNFLRLNDAFVISELFKRKAF-----REDFERIFQRKHFKTLLSTENYEKFSETKERLLEKFPQEK--------------VRFDEVEKEVYGGNIYVLSSEGLKKAHELSPLIASL--KPIKLYRIYVDRQ----------LWEKARSELK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161035 for 2944 contacts (-54.7/contact) +
2D Compatibility (PS) -38150 + (NN) -10729 + (LL) 3316
1D Compatibility (HY) -24400 + (ID) 4950
Total energy: -235948.0 ( -80.15 by residue)
QMean score : 0.340
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