Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLSSEEIIKMLPHRYPFLMVDRVQSY-KKGIIECRKNITINEPYFQGHFPQRPIVPGVLMIEMAAQSAALLYILDALDGSLPSLDELTAEKIAEKVGYLASVKNFKFKKIVTPGDQLNITCKSQSKLGHLLEIQVVIRDENKKEVASGRMLVSENGN
2GLL Chain:A ((22-168))
-SQFFIEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDP------EIAK--TKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTA-QVDGKVVAEAELKAMIAER
General information:
TITO was launched using:
RESULT:
Template:
2GLL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74161 for 1131 contacts (-65.6/contact) +
2D Compatibility (PS) -16006 + (NN) -9959 + (LL) 868
1D Compatibility (HY) -12000 + (ID) 2500
Total energy: -113758.0 ( -100.58 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_2GLL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GLL-query.scw
PDB file :
Tito_Scwrl_2GLL.pdb
: