Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEILIAGGSGFLGKQIIKAALTKGHKVAYLSRHEGKGDI---------FKDPRLTYIRGDITEADKIHLEDRTFDILIDCIGAIKPNQLDELNVKATQKAVALCHKNQ-IPKLVYISA-NSG-----Y----SAYIKSKRKAEQIIKASGLDYLFVRPGLMYGEERP-LSIFQAKCIKLFSHLPFLGIVVQKVFPTKVVIVAEAIVTTLRKKP-TQKILSIEELNNK
3C1O Chain:A ((5-215))
EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISALPFPMI--------SSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRN-DDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNI
General information:
TITO was launched using:
RESULT:
Template:
3C1O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104979 for 1382 contacts (-76.0/contact) +
2D Compatibility (PS) -20467 + (NN) -9820 + (LL) 868
1D Compatibility (HY) -8400 + (ID) 1700
Total energy: -144498.0 ( -104.56 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_3C1O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C1O-query.scw
PDB file :
Tito_Scwrl_3C1O.pdb
: