Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEPSGSPVHVQLPQQAAPVTAAAAAAPAAATAAPAPAAPAAPAPAPAPAAQAVGWPICRDAYELQEVIGSGATAVVQAALCKPRQERVAIKRINLEKCQTSMDELLKEIQAMSQCSHPNVVTYYTSFVVKDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLE--EAIIATILKEVLEGLDYLHRNGQIHRDLKAGNILLGE-DGSVQIADFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQV-RGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTLETGVEDKEMMKKYGKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQKAKNREYLIEKLLTRTPDIAQRAKKVRRVPGSSGHLHKTEDGDWEWSDDEMDEKSEEGKAAFSQEKSRRVKEENPEIAVSASTIPEQIQSLSVHDSQGPPNANEDYREASSCAVNLVLRLRNSRKELNDIRFEFTPGRDTADGVSQELFSAGLVDGHDVVIVAANLQKIVDDPKALKTLTFKLASGCDGSEIPDEVKLIGFAQLSVS |
| 4BID Chain:A ((26-280)) | -------------------------------------------------------------------VLGKGTYGIVYAGRDLSNQVRIAIKEIP-E--------LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR-------SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR-------------EEFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG----MFKVHPEIPESMSAEAKAF---ILKCFEPDPDKRACANDLLVDEFLK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -143121 for 1919 contacts (-74.6/contact) +
2D Compatibility (PS) -25870 + (NN) -15822 + (LL) 18144
1D Compatibility (HY) -16000 + (ID) 4400
Total energy: -187069.0 ( -97.48 by residue)
QMean score : 0.435
|
|
|