Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDVIISGGGLLGLITAVGLSNNSVSVAVIEKNNLPRIIDDNRAFAISQGSRKILEKLGIWQFIESEAEPILDICILDENSPITVHYNHKMVSEEPMGYVINSTVIWNAINNNFLNKLNIYSL--HSYRTITCDAGYVEVTLG--N-NQKLISSLLICAEGKNSKLPGLFSMSIIKFDYKQSSIVFNVKHELHHQNLAVEQFFPGGPFAILPMKSGYTSSIVWTEKSEISKMLM-NLSEEEFIIELKKRFGSYLGEVKLDGERKSYPLSFASAKKLYKSRVLLIGDAAHSIHPVAGQGLNLGIRDAESVVRQITAAKAFGIDVGSSYLLKKISRDRCLDNFTMALATDGLNRIFSNRIFCAKTLRNFGLMAVENSKFLKKRFIRHAMGFV |
| 2QA2 Chain:A ((11-349)) | SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQ--RTGESRGLGFTARTMEVFDQRGILPAFGPVETS---TQGHFGG-RP-VDFGVLE-GAHYGVKAVPQSTTESVLEEWALGR-GAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEIT-PRPIGETVPLGMVMSAPLGD-GVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDISHGEP-VWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVS-GRA--PAGLLDTYHEERHPVGRRLLMNTQAQGMLFLSGDEMQPLRDVLSELIRYDEVSRHLAGMVSGLDIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169429 for 2798 contacts (-60.6/contact) +
2D Compatibility (PS) -35082 + (NN) -1092 + (LL) 680
1D Compatibility (HY) 400 + (ID) 2650
Total energy: -207173.0 ( -74.04 by residue)
QMean score : 0.377
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