Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
4OOP Chain:A ((30-157))
-----------KVKKLS--EKAVIPTRGSPLSAGYDLSSAVDSKVPAR--GKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDV--GAGVIDADYRGPVGVILFNHSDADFEVKFGDRIAQLIIEKI--VTPDVVEVDDLDETVRG---------
General information:
TITO was launched using:
RESULT:
Template:
4OOP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76843 for 858 contacts (-89.6/contact) +
2D Compatibility (PS) -13819 + (NN) -3854 + (LL) 872
1D Compatibility (HY) -5600 + (ID) 2750
Total energy: -101994.0 ( -118.87 by residue)
QMean score : 0.362
(partial model without unconserved sides chains):
PDB file :
Tito_4OOP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OOP-query.scw
PDB file :
Tito_Scwrl_4OOP.pdb
: