Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIERTLSILKPDTVKNNIIGNINSYIEKSGLRIIAQKMMLLTKKQAELFYAIHKDRPFFGGLVEFMTSGPVIVQVLVGENAISKYRQIMGATDPKQADKGTIRGDFADDVNENRVHGSDSLENAHKEIAFFFAECELV
3Q8U Chain:E ((1-137))
--MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEIT
General information:
TITO was launched using:
RESULT:
Template:
3Q8U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62351 for 1070 contacts (-58.3/contact) +
2D Compatibility (PS) -14454 + (NN) -2330 + (LL) 352
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -93333.0 ( -87.23 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_3Q8U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q8U-query.scw
PDB file :
Tito_Scwrl_3Q8U.pdb
: