Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MAYKIDDKQDQRLVNDTLNQIDIPEGYILHSDQGSVYTSYAYYQLCEEKGIIRSMSRKGTPADNAPIESFHSSLKSETLYINNQLNSSNHIVIDIVEKYIKNYNNNQIQQKLGYLSPVKYRELIA
3UV0 Chain:A ((3-99))
DVSLFFGGLPAILLKADTIYRIGRQKGLEISIADESMELAHATACILR-RGVVRLAALVGK------------------IFVNDQEETVVDIG-------MENAVAGKVKLRFG---NVEARLEFG
General information:
TITO was launched using:
RESULT:
Template:
3UV0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35292 for 702 contacts (-50.3/contact) +
2D Compatibility (PS) -10368 + (NN) -1128 + (LL) 1748
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -49490.0 ( -70.50 by residue)
QMean score : 0.232
(partial model without unconserved sides chains):
PDB file :
Tito_3UV0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UV0-query.scw
PDB file :
Tito_Scwrl_3UV0.pdb
: