Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNGAVFFVIFLKQATCNTYFKEVKIYHLGEMDM---KIVALFPEAVEGQENQLLNTKKAI-GLKTFLEERGHEFIILAD------NGEDLDKHLPDMDVIISAPFYPAYMTRERIEKAPN-LKLAITAGVGSDHVDLAAASEHNIGVVEVTGSNTVSVAEHAVMDLLILLRNYEEGHRQSVEGE-WNLSQVGNHAHELQHKTIGIFGFGRIGQLVAERLAPFNVTLQHYDP-----INQQDHKLSKFVSFDELVSSSDAITIHAPLTPETDNLFDKDVLSRMKKHSYLVNTARGKIVNRDALVEALASEHLQGYAGDVWYPQPAPADHPWRTMPRNAMTVHYSGMTLEAQKRIEDGVKDILERFFNHEPFQDKDIIVASGRIASKSYTAK |
| 2NAC Chain:A ((1-374)) | -----AKVLCVLYDDPVDGYPKTYARDDLPKIDHYPGGQTLPTPKAIDFTPGQLLGSVSGELGLRKYLESNGHTLVVTSDKDGPDSVFERELVDAD---VVISQPFWPAYLTPERIAKAKNL-KLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWAR-KGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEYLIVQGGALA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201117 for 2938 contacts (-68.5/contact) +
2D Compatibility (PS) -38655 + (NN) -14184 + (LL) 768
1D Compatibility (HY) -25200 + (ID) 7650
Total energy: -286038.0 ( -97.36 by residue)
QMean score : 0.494
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