Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRALETIATLREYRKS---LKESVGFVPTMGALHRGHQSLIERSLKENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKAC--------EKLKKLGLEILKNLEVDYLECCNHKLEPLKTIEPANTLVLVAARVGKTRLLDNLWV
3AG6 Chain:A ((2-280))TKLITTVKEMQHIVKAAKRSGTTIGFIPTMGALHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVGADIVFHPAVEDMYPGEL---GIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVKDFNHAVEIIGIDIVREADGLAKSSRNVYLTEQERQEAVHLSKSLLLAQALYQDGERQSKVIIDRVTEYLES-----HISERIEEVAVYSYPQLVEQHEITGRIFISLAVKFSKARLIDNIII


General information:
TITO was launched using:
RESULT:

Template: 3AG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114725 for 2186 contacts (-52.5/contact) +
2D Compatibility (PS) -28887 + (NN) -11710 + (LL) 772
1D Compatibility (HY) -21200 + (ID) 5450
Total energy: -181200.0 ( -82.89 by residue)
QMean score : 0.385

(partial model without unconserved sides chains):
PDB file : Tito_3AG6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AG6-query.scw
PDB file : Tito_Scwrl_3AG6.pdb: