Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGFLKGKKGLIVGVANNKSIAYGIAQSCFN-QGATLAFTYLNESLEKRVRPIAQELNSPYVY-----------ELDVSKEEHFKSLYNNIKQDLGS-LDFIVHSVAFAPKEALEGSLLET---SKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTKYMAHY--NVMGLAKAALESAVRYLAVDLGK-HNIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKN---VSLEEVGNAGMYLLS-SLSNGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKEQ |
1DFI Chain:A ((1-257)) | G-FLSGKRILVTGVASKLSIAYGIAQAMHRE-GAELAFTYQNDKLKGRVEEFAAQLG-----SDIVLQCDVAE------DASIDTMFAELGKVWP-KFDGFVHSIGFAPGDQLD-GDYVNAVT-REGFKIAHDISSYSFVAMAKACRSM---LNPGSALLTLSYLGAER-AIPNYN-VMGLAKASLEANVRYMAN-AMGPEGVRVNAISAGPIRTL---------MLAHCEA-VTPI--RRTV-TIEDVGNSAAFLCSD-LSAGISGEVVHVDGGFSIAA-----------MNE------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -173657 for 1712 contacts (-101.4/contact) +
2D Compatibility (PS) -23892 + (NN) -5912 + (LL) 2548
1D Compatibility (HY) -20000 + (ID) 4700
Total energy: -225613.0 ( -131.78 by residue)
QMean score : 0.545
|
|
|