Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRELMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENAHNEIAFFFAAREF
1S5Z Chain:A ((8-143))
-KERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEEL
General information:
TITO was launched using:
RESULT:
Template:
1S5Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69098 for 1060 contacts (-65.2/contact) +
2D Compatibility (PS) -14247 + (NN) -1272 + (LL) 208
1D Compatibility (HY) -12000 + (ID) 3100
Total energy: -99509.0 ( -93.88 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1S5Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S5Z-query.scw
PDB file :
Tito_Scwrl_1S5Z.pdb
: