Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEIKNLNCVLNSHFSLQNINISLSYSERVAIVGESGSGKSSIANLVMRLNPRFKPHNGEILFETTNLLKESEAFMQHLRGNIIAYIAQDPLSSLNPLHKIGKQMSEAYFLHHKNASQVLLKEQVLNAMKQVQLDEKFLDRYPYELSGGQRQRVCIAMGIINA--PKLLICDEPTTALDAQIQNQILDLLKQLSVEKNIALLFISHDLKAVKRLADRVYVL------KKGEIVETNLTKELFNDPKHEYSKLLIQASNLPAKNLKALDETLLEVKDFSVYYLQKRFFRPSLKKPLIASVDFSLKAKENIGIIGESGSGKSSLALGLL-KLAL-----NSGEEKI-------------LGQSVGLLNSKAFKPYRKILQMVFQDPYAS-----------------LN----------------------------------------------PRLSIQSILIEALRFAYPKASQQEWHHLAELCLEEVCLNPELLNFYAYELSGGERQRVAIARAIALKP---RIILLDEPTSALDKSIQKSVLELLLNLQEKQDLSYLFISHDLDVIKAFCDRVLVV------SEGKIVETGAIEEVFDNPKHAYTKRLLESRL |
| 2VF7 Chain:A ((362-839)) | -------------------------------------------------------------------------------------------------------------------------------VLLHLGLGYLGLDRSTPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPADTEALLSALENLKR-GGNSLFVVEHDLDVIRR-ADWLVDVGPEAGEKGGEILYSGPPEGLKHVPESQTGQYLFADRH-TEPHTPREPAGWLELNGVT--------------RNNLDNLDVRFPLGVMTSVTGVSGSGKSTLVSQALVDALAAHFGQ--GSARLGGDLAQITRLVRVDQKPIGRTPR---SNMATYTGLFDQVRKLFAATPLAKKRGYNAGRFSFNVKGGRCEHCQGEGWVMVELLFLPSVYAPCPVCHGTRYNAETLEVEYRGKNIADVLALTVDEAHDFFADESAIFRALDTLREVGLGYLRLGQPATELSGGEAQRIKLATELRRSGRGGTVYVLDEPTTGLHPADVERLQRQLVKLVD-AGNTVIAVEHKMQVVA-ASDWVLDIGPGAGEDGGRLVAQGTPAEVAQAAG-SVTAPYLRAAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117747 for 2863 contacts (-41.1/contact) +
2D Compatibility (PS) -38629 + (NN) -9973 + (LL) 11240
1D Compatibility (HY) -14000 + (ID) 4300
Total energy: -173409.0 ( -60.57 by residue)
QMean score : 0.300
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