Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKMNAPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCVQCELHCPDFAIYVADRKDFKFAKVSKEAQERSEKVKANKYMLLEETILEGRGK
1HFE Chain:L ((24-85))
-------KLHFVQIDEAKCIGCDTCSQYCPTAAIFGEMGEPHS------IPHIEACINCGQCLTHCPENAIYEAQSWVPEVEKKLKDGKVKCIAMPAPAVRYALGDAFGMPVG
General information:
TITO was launched using:
RESULT:
Template:
1HFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50098 for 412 contacts (-121.6/contact) +
2D Compatibility (PS) -6040 + (NN) -946 + (LL) 1016
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -59168.0 ( -143.61 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1HFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HFE-query.scw
PDB file :
Tito_Scwrl_1HFE.pdb
: