Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MVRDIDKTTSLHLNNEA--------QFLCFRL-DAEKDAQLYGMNI---FKIREIIHYDGEVTEILGGSDGVMLGFLSVRGE-SIPLVDVKRWLHYNANDPSRDLKECSVKDDHNLVIVCHFSN-------------HSIALKVLKIERIIHKNWTEISA-GDKQGINEEGKLSAITRF----DEQRVVQILDVEKMISDVFPSLKDLDDLTLRCIEA--------IQSQKLILIAEDSLSALKTLEKI-VQTLELRYLAFPNGRELLDYLYEKEHYQQVGVVITDLEMPVISGF-EVLKTIKADSRTEHLPVIINSSMSSDSNRQLAQSLEAD--------------GFVVKSNILEIHEMLKKTLS |
| 1YT3 Chain:A ((1-375)) | MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSPLKAILR-DPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAF-CGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRF----HGKTLLALVEKAQTLPEDALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLA-SRRQINQLLNWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53831 for 2228 contacts (-24.2/contact) +
2D Compatibility (PS) -32370 + (NN) -6870 + (LL) 248
1D Compatibility (HY) -12000 + (ID) 3150
Total energy: -107973.0 ( -48.46 by residue)
QMean score : 0.215
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