Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAV----AHSSAKNPMFSLDERLKMMQLATKSFKNVECVAF---EGLLADLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPFISKV--
1B6T Chain:A ((3-159))
--KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPS----KKPMFTLEERVALAQQATAHLGNV-EVVGFSD--LMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA
General information:
TITO was launched using:
RESULT:
Template:
1B6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122871 for 1130 contacts (-108.7/contact) +
2D Compatibility (PS) -15716 + (NN) -3014 + (LL) 496
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -158105.0 ( -139.92 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_1B6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B6T-query.scw
PDB file :
Tito_Scwrl_1B6T.pdb
: