Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKD-FTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFEEHGEVCPAGWRKGDKGMKATHQGVAEYLKENSIKL
1ZOF Chain:A ((1-170))
MVVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFW-PKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFEEHGEVCP----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZOF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102914 for 1340 contacts (-76.8/contact) +
2D Compatibility (PS) -18055 + (NN) -4294 + (LL) 1468
1D Compatibility (HY) -26400 + (ID) 8300
Total energy: -158495.0 ( -118.28 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_1ZOF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZOF-query.scw
PDB file :
Tito_Scwrl_1ZOF.pdb
: