Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSKLICIIMVIAFQAHFTMTVKADSVGEEKLQNNTQAKKTPADLKALPDSCEAKDFYKNFKILDMTKDKLGVTHYTLALSSGGYLTDNDEIKVHVTPDNKITFINGDLQQGQLRITNQIKITEKNAIEKAFEAIGQSEAHVKSYVGNPVKEKEIILNSRTKRLVYNIKLIFAEPEVASWIVQVDVETGAILKKQNMLSEVERADTHKDFQALGKGANRLL--QRPLHVMKINDLFYLVDRTHKGLIRTFDLKHNTDTSFGKVVSNKTNMF--TDPEFSSAVDAHFYASEVYEYYKNVHQLESLDGKGGEIDSFVHYGL-----NCNNAFWDGQEILYGDGDKKNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIAPNH--WLIGEDVCVRGSRDGRIRSIKDPDKYNQAAHMKDYESLPLTEEGDWGGVHYNSGIPNKAAY-----NTITKLGKEKTEQLYFRALKYYLTKKSQFTDAKKALQQAAKDLYGEDASKKVAEAWEAVGVN |
| 1BQB Chain:A ((1-301)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGTGKGV---LGDTKDININSIDGGFSLEDLTHQGKLSAYNFNDQTGQ-A-TLITNEDENFVK--DDQRAGVDANYYAKQTYDYYKNTFGRESYDNHGSPIVSLTHVNHYGGQDNRNNAAWIGDKMIYGDGDGRTFTNLSGANDVVAHEITHGVTQQTANLEYKDQSGALNESFSDVFGYFVDD--EDFLMGEDVYTPGKEGDALRSMSNPEQFG-Q---PSHMKDYVYTEKDNGGVHTNSGIPNKAAYNVIQA-----IGKSKSEQIYYRALTEYLTSNSNFKDLKDALYQAAKDLYEQQTAEQVYEAWNEVGVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96730 for 2499 contacts (-38.7/contact) +
2D Compatibility (PS) -30215 + (NN) -5116 + (LL) 16608
1D Compatibility (HY) -16800 + (ID) 6400
Total energy: -138653.0 ( -55.48 by residue)
QMean score : 0.486
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