Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKAFLSIGTNIGERLENLNDALRGLAASNQINITNVSSVYETDAVGYEDQAAFLNIAVEIETDFPPIDLLDFCLALELELGRVR-LFKWGPRLIDIDVLLYDDVKTDTEKLKIPHPYMKERAFVMIPLIEISPE-----KSNLVENPALLEEQGVRKIKNQVNW
1Q0N Chain:A ((1-158))
-TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW------
General information:
TITO was launched using:
RESULT:
Template:
1Q0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99332 for 1166 contacts (-85.2/contact) +
2D Compatibility (PS) -16144 + (NN) -4943 + (LL) 580
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -133539.0 ( -114.53 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_1Q0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q0N-query.scw
PDB file :
Tito_Scwrl_1Q0N.pdb
: