Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MTYKFPENFWWGSAASGPQTEGAADVDGRKPSIWDHWYK--IEPGRFFNDVGPTNTSNFYYQYKEDIALMKQTGHNSFRTSIQWSRLIPDGIGE-VNPKAVDFYNRVIDEMLANDVEPFMNLYHFDMPMSMQ--EKGGF---ESREVVDAYATFAKTCFELFGDRVKHWFTFNEPIVPVEAGYLYDM------HYPNVVDFKRATQVAYHTTLAHALAVKEFHALEIPE-GQIGIILNLTPSYPRSQNPADLKAAHIADLIFNRSFLDPVTKGEFPTDLVEIIREHDALPEYTEEDLAIIKNNIIDILGVNYYQPRRVKAKEYAAHP----DAPFMPEHLFDNYEMPYRKMNPYRGWEIFERAIYDIAINLRDNYDNIPFFISENGMGVE-GESRYRNADGMIEDTYRIDFIKSHLKWLHKAIEEGANCHGYHLWTFMDCWSWANAYKNRYGLVEVDLDNDFKRTVKASGHWYKELAENNGFED |
| 1QOX Chain:A ((2-450)) | SIHM---FPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAHTP---GKVKNGDNGNVACDSYHRVEEDVQLLKDLGVKVYRFSISWPRVLPQGTG-EVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQDQ--GGWGSR---ITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAPGNK------DLQLAIDVSHHLLVAHGRAVTLFRELGI--SGEIGIAPNTSWAVPYRRTKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYKPPIVDGDMELIHQPI-DFIGINYYTSSMNRYNP-----GEAGGMLSSEAIS------MGAPKTDIG-WEIYAEGLYDLLRYTADKYGNPTLYITENGACYNDG----LSLDGRIHDQRRIDYLAMHLIQASRAIEDGINLKGYMEWSLMDNFEWAEGYGMRFGLVHVDYDT-LVRTPKDSFYWYKGVISRGWLDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224512 for 3837 contacts (-58.5/contact) +
2D Compatibility (PS) -45673 + (NN) -17379 + (LL) 1976
1D Compatibility (HY) -30800 + (ID) 7550
Total energy: -323938.0 ( -84.42 by residue)
QMean score : 0.559
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