Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRARKKIDSTLEGKIHA------SLTGDNNEKTLIIEDNGIGLTEDEVHAFLATIANSSKGEKNFDGESSNDFIGRFGIGLLSCFIVSDEIVMISTSQKDGGTTEWRGKADGTYSVRKIETDTREPGTQVYLRLRAGLEDHPECEDVEYLINTLKKYGASLESNIIVEMNGLEEEINSWTKQFSDKETLSTLSREQIIQYGEYILG--THFQDYFLIENESGRTFGIAYMIPHAVQMNAIRKNTVFLNKMFVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVASELGVALKKGIETLPEEALMK-LLATHYLGFKALASEDAPFLKLIYPYLPVR-------TLNGEEKLGDIIAKNDVIYYTYSVDDFRQIK-----DIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIQPEEMTDKLRPMTADEKQAYQPILTEMNSMMAE------FDTDVLIKHFEPKDLPIIFIHSTATQELRELERAVEETTSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSEK---TVKELSVIVNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML- |
| 2O1U Chain:A ((34-661)) | --------------MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTV------------------------GFYSAFLVADKVIVTSK-HNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLK---EEASDYLELDTIKNLVKKYSQFINFPIYVWSSKVWDWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPT----SAPRYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYNDTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAG-SSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEF-DGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTG------KDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196895 for 4120 contacts (-47.8/contact) +
2D Compatibility (PS) -58653 + (NN) -17488 + (LL) 2912
1D Compatibility (HY) -24800 + (ID) 5100
Total energy: -300024.0 ( -72.82 by residue)
QMean score : ?
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