Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKYDDKHFFEQYSQMPRSKEGLQAAGEWHEFKKLLPDFHQKVVLDLGCGFGWHCIYAAEQGAKKVVGVDLSARMLTEAKHKTTSPIVHYERRAMENIDIEPETYDIVLSSLALHYVASFNDICQKVNTNLITGGSFVFSVEHPIFTADGRQDWFTDEAGNKLHWPVDRYFNESIRTSHFLGEDVQKYHRTLTTYIQTLLKNGFQINSIIEPEPAPEL-KDLPEMQDEYRRPMMLIISATKN
3BKW Chain:A ((32-243))
------------------------------WPALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEG-RRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEFCPTDAQITARPELAEELDRPMFLLVSARR-
General information:
TITO was launched using:
RESULT:
Template:
3BKW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119069 for 1619 contacts (-73.5/contact) +
2D Compatibility (PS) -22258 + (NN) -5076 + (LL) 1572
1D Compatibility (HY) -19600 + (ID) 4100
Total energy: -168531.0 ( -104.10 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_3BKW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BKW-query.scw
PDB file :
Tito_Scwrl_3BKW.pdb
: