Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGRKTYESLGKALPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAETGEPIYIVGGAEIYRLFMDVADQLIVTKIDAEFEADTAFPEVDWENFSEVAKEFHEKDEKNKYNYTFYTYERN
4OSG Chain:C ((4-158))
-LIAALAVDRV--IGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSD-DRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILER-
General information:
TITO was launched using:
RESULT:
Template:
4OSG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94935 for 1105 contacts (-85.9/contact) +
2D Compatibility (PS) -16550 + (NN) -4787 + (LL) 52
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -132720.0 ( -120.11 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_4OSG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OSG-query.scw
PDB file :
Tito_Scwrl_4OSG.pdb
: