Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLMMKNITKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAGKSTFLSIAGALLSPTEGEIAIGGKVLNDLTSKDLTKVRLDKVGFIFQGANLIPYLNVRDQLLVIAELSGDKGRVAKE-KADELLKELGLTARENNYPESLSGGEKQRVAIARALMNDPDIILADEPTASLDASRGHKVVQMIADEVKRKNKAAIMVT-HDER-VLDLVDRVIRIEDGYLKD
4P32 Chain:A ((2-214))
-TLTAKNLAKAYK-GRRVVE---DVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARAR---RGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRII--EHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHL--
General information:
TITO was launched using:
RESULT:
Template:
4P32.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111887 for 1707 contacts (-65.5/contact) +
2D Compatibility (PS) -23202 + (NN) -12339 + (LL) 1088
1D Compatibility (HY) -16400 + (ID) 3550
Total energy: -166290.0 ( -97.42 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_4P32.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P32-query.scw
PDB file :
Tito_Scwrl_4P32.pdb
: