Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
3NGS Chain:B ((4-134))
-ERTFIAVKPDGVQRGLVGEIIARFERKGYKLVALKILQPTTEQAQGHYKDLCSKPFFPALVKYFSSGPIVCMVWEGKNVVKSGRVLLGATNPADSQPGTIRGDFAV-----DVGRNVCHGSDSVESAEREIAFWFKA
General information:
TITO was launched using:
RESULT:
Template:
3NGS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70399 for 1007 contacts (-69.9/contact) +
2D Compatibility (PS) -13795 + (NN) -3685 + (LL) -36
1D Compatibility (HY) -12800 + (ID) 3200
Total energy: -103915.0 ( -103.19 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_3NGS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NGS-query.scw
PDB file :
Tito_Scwrl_3NGS.pdb
: