Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELKGVNFKYKNTKNSCLDNIDLEIKKGEFVLISGASGSGKTSITRVINKLIPYYYEGELEGTVKINND-----------LVSSYQMFELSEIVGSV--FQNPRTQFFNVDTNSEIVFGLENQGVSRDILKKRLKETCETLDINKLQNRNIFHLSGGEKQKIAFASVYAMNPDIYLLDEPSSNLDIPTIEVLKRHLSVLKNSGKTVIISEHRIYYLMDLVDKVIYMKNGQIQKS-----YSKEDFLNLSE-DEI--KAMALRCRKKTKLNIEMS-----NNEKHPYLQVNDFSIYRKDNCIINNMNFSANKGDIVAVIGSNGVGKTTFLRTLCGLHDNYKGDVLLNSKKTDAKKRRQKNYMVMQDVNYQLFAESVFAECKLGIEN--VSDDLIEEILNEFDLSDYKNNHPNTLSGGQKQRLAIAVGLICKKEIFVLDEPTSGLDYTNMVKTVELLKRYS--KDKIIFIATHDTEFANLICNRVLDLEK |
| 3J16 Chain:B ((82-542)) | -----HVTHRYSA-NSFKLHRLP-TPRPGQVLGLVGTNGIGKSTALKILAGKQKPN-----LGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYV--DNIPRAIKGPVQKVGELLKLRMEKSPEDVKRYIKILQLENVLKRDIEKLSGGELQRFAIGMSCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCIIYGVPSVYGVVTLPASVREGINIFLDGHIPAENLRFRTEAL-QFRIADATEDLQNDSASRAFSYPSLKKTQG-DFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIP----------KLNVSMKPQKIA-PKFPGTVRQLFFKKIRGQFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVFEG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140777 for 3429 contacts (-41.1/contact) +
2D Compatibility (PS) -45783 + (NN) -10562 + (LL) 1876
1D Compatibility (HY) -16800 + (ID) 4550
Total energy: -216596.0 ( -63.17 by residue)
QMean score : 0.364
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