Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
1U43 Chain:A ((1-155))
-MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLI--
General information:
TITO was launched using:
RESULT:
Template:
1U43.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105201 for 1333 contacts (-78.9/contact) +
2D Compatibility (PS) -16681 + (NN) -9687 + (LL) 100
1D Compatibility (HY) -14400 + (ID) 4900
Total energy: -150769.0 ( -113.11 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_1U43.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U43-query.scw
PDB file :
Tito_Scwrl_1U43.pdb
: