Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKFPKKLLPIAVLSSIAFSSLASGSVPEASAQEKKKGNQDEIKNVIVLIGDGMGVSYTSAYRYLKDNKKTK-------VVEPTAFDQYLVGQQTTYPDDPEQNVTDSAAAATAMSAGIKTYNNAIAVDNDGSEAKTVLEAAKEKGKATGLVATSEITHATPASFGSHDHSRKNMNSIADDY--------------FDEMVNGKHKIDVLLGGGKSNFDRK-------DRNLIKEFKK-AGYSYVDDRKDMLKNKD----SQVLGLFADGGLPKKI-----------------------DRTKDIPSLKDMTNTAIKKLNKDKDGFFLMVEGSQIDWAGHDNDIVGAMSEMEDFEQAYKAAIDFAKKDKHTLVVATADHSTGGYSIGADGIYNWFSEPIKAAKRTPDFMAEKIADGADVEKTLKTYIDQKKLALTKAEIQSVEEAAKSKEVLDIDNAIENIFNKRSHTGWTTGGHTGEDVPVYAYGPSSETFAGQIDNTEIAKNVFKALQYNIKINDK
1ED9 Chain:A ((1-449))TPEMPVLENRAAQGDITAPGGARRLTGDQTAALRDS-LSDKPAKNIILLIGDGMGDSEITAARNYAE-----GAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNA-RADVTLGGGAKTFAETATAGEWQGKTLREQAQAR-GYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVR-WLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAP------------------------DTKAPGLTQALNTKDG-AVMVMSYGNSE-----------------------------EDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK------


General information:
TITO was launched using:
RESULT:

Template: 1ED9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2469 -61375 -24.86 -156.17
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -24.86
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.319

(partial model without unconserved sides chains):
PDB file : Tito_1ED9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ED9-query.scw
PDB file : Tito_Scwrl_1ED9.pdb: