Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPAVQPWLYSNMPAIRGAVLDQIGVPRPYWRSKPISVVELHLDPPDRGEVLVRIEAAGVCHSDLSVVDGTRVRPV-PILLGHEAAGIVEQVGDGVDGVAVGQRVVLVFLPRCGQCAACATDGRTPCEPGSAANKAGTLLGGGIRLSRGGRPVYHHLGVSGFATHVVVNRASVVPVPHEVPPTVAALLGCAVLTGGGAVLNVGDPQPGQSVAVVGLGGVGMAAVLTALTYTDVRVVAVDQLPEKLSAAKALGAHEIYTPQ-----------QATAGGVKAAVVVEAVGHPAALHTAIGLTAPG-GRTITVGLPPPDVRISLSPLDFVTEGRSLIGSYLGSAVPSHDIPRFVSLWQSGRLPVESLVTSTIRLDDINEAMDHLADGIAVRQLISFTGDL
3HUD Chain:A ((1-374))------------STAGKVIKCKAAVLWE--VKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGN-LVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVD--FSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLT-GRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVLTF----


General information:
TITO was launched using:
RESULT:

Template: 3HUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -286240 for 3287 contacts (-87.1/contact) +
2D Compatibility (PS) -39354 + (NN) -20074 + (LL) 1628
1D Compatibility (HY) -26000 + (ID) 6050
Total energy: -376090.0 ( -114.42 by residue)
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_3HUD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HUD-query.scw
PDB file : Tito_Scwrl_3HUD.pdb: