Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEPLRVPPSAPARLVVLASGTGSLLRSLLDAA-VGDYPARVVAVGVDR-ECRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVGRTATMGRKVTIG
4ZZ1 Chain:A ((2-192))
------------ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNG-MLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQL--------------
General information:
TITO was launched using:
RESULT:
Template:
4ZZ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157254 for 1539 contacts (-102.2/contact) +
2D Compatibility (PS) -21438 + (NN) -13427 + (LL) 1400
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -206269.0 ( -134.03 by residue)
QMean score : 0.645
(partial model without unconserved sides chains):
PDB file :
Tito_4ZZ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZZ1-query.scw
PDB file :
Tito_Scwrl_4ZZ1.pdb
: