Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSFEGKVAVITGAGSGIGRALALNLSEKRAKLALSDV-DTDGLAKTVRLAQALGAQVKSDRLDVAEREAVLAHADAVVAHFGTVHQVYNNAGIAYNGNVDKSEFKDIERIIDVDFWGVVNGTKAFLPHVIASGDGHIVNISSLFGLIAVPGQSAYNAAKFAVRGFTEALRQEMLVARHPVKVTCVHPGGIKTAVARNATVADGEDQQTFAEFFDRRLALHSPEMAAKTIVNGVAKGQARVVVGLEAKAVDVLARIMGSSYQRLVAAGVAKFFPWAK
1NFF Chain:B ((5-190))---LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA----ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALEL--GPSGIRVNSIHPGLVKTPM----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NFF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77093 for 1573 contacts (-49.0/contact) +
2D Compatibility (PS) -19551 + (NN) -5233 + (LL) 7780
1D Compatibility (HY) -12400 + (ID) 3200
Total energy: -109697.0 ( -69.74 by residue)
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_1NFF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NFF-query.scw
PDB file : Tito_Scwrl_1NFF.pdb: