Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENVSYGLTLCAECAVVCALHSTGGGRLLALACVDGHGSVLMPCGRCRQVLLEHGGSELLIDHPV-----RPRRLGDLLPDAFGLDDLPRERR
1UWZ Chain:A ((2-130))
----NRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAEATALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSEDL-----
General information:
TITO was launched using:
RESULT:
Template:
1UWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83870 for 986 contacts (-85.1/contact) +
2D Compatibility (PS) -13630 + (NN) -5881 + (LL) 448
1D Compatibility (HY) -6000 + (ID) 2250
Total energy: -111183.0 ( -112.76 by residue)
QMean score : 0.278
(partial model without unconserved sides chains):
PDB file :
Tito_1UWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UWZ-query.scw
PDB file :
Tito_Scwrl_1UWZ.pdb
: