Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKLLHIDSSILGDASASRQLSAELVQAWRQNEDGLDVTYRDLAADAVAHFSALTLAAGSTPAELRDAALKHEVAVGEEVLEEFLAADVVVIGAPM-YNFTISSQLKAWIDRIAVAGKTFRYTENGPVGLAGDKKVVIVSTAGGVHAGQPTGAAHEGYLRTVLGFFGITDIEVVRAEGLAYGEEPRTQAIAAARRQIAGQFAAA
1TIK Chain:A ((2-204))
SLSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIA-APMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDL-VTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSAE
General information:
TITO was launched using:
RESULT:
Template:
1TIK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103776 for 1532 contacts (-67.7/contact) +
2D Compatibility (PS) -22552 + (NN) -11657 + (LL) 288
1D Compatibility (HY) -16400 + (ID) 4050
Total energy: -158147.0 ( -103.23 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_1TIK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIK-query.scw
PDB file :
Tito_Scwrl_1TIK.pdb
: