Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGAQMNKIEVKNVFKIFGPRADAALALIRQGRSKGEVLAQTGCVVGVNDLSLSIGAGEIFVIMGLSGSGKSTLVRHFNRLIDPTSGEILVDGEDILRYDMEALRQFRRRKISMVFQSFGLLPHKSVLDNVAY---GLKVRGESRAQCHERALHWIATVGLKGYEKSYPHQ---LSGGMRQRVGLARALAADTEIILMDEAFSALDPLIRADMQDQLLELQKTLHKTIVFITHDLDEAVRIGNRIAILKDGQLIQVGTPREILHQPADDYVDRFVQRRVANL |
2FGK Chain:B ((25-238)) | -----------------------------------------------LDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWL----RRQVGVVLQDNVLL-NRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISEL-REGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKICKG--RTVIIIAHRL-STVKNADRIIVMEKGKIVEQGKHKELLSEPESLY------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121109 for 1581 contacts (-76.6/contact) +
2D Compatibility (PS) -21934 + (NN) -2571 + (LL) 4988
1D Compatibility (HY) -17200 + (ID) 3650
Total energy: -161476.0 ( -102.14 by residue)
QMean score : 0.504
|
|
|