Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFHQLSDKINIEILKQKTSLDLEVSQKKLAKEEELKNIIKGEDQRFLVIVGPCSADNPKAVLTYAKRLAKLEAAFKDKMFLVMRVYTAKPRTNGDGYKGLVHHSDKLGV------FFQARKMHYDIIRETGLLTADELLYPEMLSVMDDLVSYYAIGARSVEDQGHRFISSGIDAPVGMKNPTSGNLRVMLNAVYAAQNQQE---LFYQN--KQVRTDGNLLSHVILRGYHNADYRSIPNYHYENLLETITHYEETDLQNPFIVVDTNHDNSGKQFLEQIRIVKSVLADRQWHTKIRNYVRGFLIESYLEDGRQDKPDVFGKSITDPCLGWDKTEMLIRDIYNSL |
| 1OF8 Chain:A ((23-361)) | VRILGYDPLASPALLQVQIPATPTSLETAKRGRREAIDIITGKDDRVLVIVGPCSIHDLEAAQEYALRLKKLSDELKGDLSIIMRAYLEKPRTTV-GWKGLINDPDVNNTFNINKGLQSARQLFVNL-TNIGLPIGSEMLDTISPQYLADLVSFGAIGARTTESQLHRELASGLSFPVGFKNGTDGTLNVAVDACQAAAHSHHFMGVTKHGVAAITTTKGNEHCFVILRGGK-----KGTNYDAKSVAEAKAQLPA-G--SNGLMIDYSHGNSNKDFRNQPKVNDVVCEQIAN---GENAITGVMIESNINEGNQGI-LKYGVSITDACIGWETTEDVLRKLAAAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116147 for 2828 contacts (-41.1/contact) +
2D Compatibility (PS) -34517 + (NN) -12868 + (LL) 676
1D Compatibility (HY) -12000 + (ID) 5250
Total energy: -180106.0 ( -63.69 by residue)
QMean score : 0.508
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