Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLRSLASPAALTDPKRCASVVGVAAFAVRREHAPDALGGPP-GLP-APRGFRAAFAAAYAVAYLAGGERRMLRLIRRYGPIMTMPILSLGDVAIVSDSALAKEVFTAPTDVLLGGEGVG-PAAAIYGSGSMFVQEEPEHLRRRKLLTPPLHGAALDRYVPIIENSTRAAMHTWP------VDRPFAMLTVARSLMLDVIVKVIFGVDDPEEVRRLGRPFERLLNLGVSEQLTVRYALRRLGALRVWPARARANTEIDDVVMALIAQRRADPRLGERHDVLSLLVSARGESGEQLSDSEIRDDLITLVLAGHETTATTLAWAFDLLLHHPDALRRVRAEAVGGGEAFTTAVINETLRVRPPAPLTARVAAQPLTI-----GGYRVEAGTRIVVHIIA-INRSAEVYEHPHEFRPERFLGTRP------------QTYAWVPFGGGVKRCLGANFSMRELITVLHVLLREGEFTAVDDEPE----RI-VRRSIMLVPRRGTRVRFRPAR |
| 3B98 Chain:A ((13-470)) | ---------------------------------RTRRRNEPPLDKGMIPWLGHALE-------FGKDAAKFLTRMKEKHGDIFTVRAAG-LYITVLLDSNCYDAVLSDVA-SLDQTSYAQVLMKRIF--NMILPSHNPESEKKRAEM--HFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGAENNN-SAALTQIYEEFRRFD---KLLP-KLARTTVNKEEKQIASAAREKLWKWLTPSGLDRK-----PREQSWLGSYVKQLQD--EGIDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--NTPVFDSVLWETLRLTAAAL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243685 for 3289 contacts (-74.1/contact) +
2D Compatibility (PS) -44621 + (NN) -18219 + (LL) 4168
1D Compatibility (HY) -13200 + (ID) 3900
Total energy: -319457.0 ( -97.13 by residue)
QMean score : 0.444
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