Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAPSPSGGGGSGGGSGSGTPGPVGSPAPGHPAVSSMQGKRKALKLNFANPPFKSTARFTLNPNPTGVQNPHIERLRTHSIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATV-----KALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPY-MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPSSPMYVD |
| 4ZY6 Chain:B ((28-274)) | ----------------------------------------------------------------------------------------------------------KIGQGASGTVYTAMDVATGQEVAIKQM--NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG----------SLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-QVIHRNIKSDNILLGMDGSVKLTDFGF--------SKRSTMVGTPYWMAPEVV----TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-LRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZY6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108292 for 1684 contacts (-64.3/contact) +
2D Compatibility (PS) -24781 + (NN) -17116 + (LL) 4468
1D Compatibility (HY) -20800 + (ID) 4300
Total energy: -170821.0 ( -101.44 by residue)
QMean score : 0.400
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