Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MRKEIRNLKIASVLRRAISKVLMEG----KVFNKNVVISDVKLSGDLKKADVYIVLSSLSKKKYNINTVVDEINQSAWLIRKSILSYVDLRFIPKLVFKADLAFDNFVNISKILSNYT------
2E7G Chain:A ((79-207))
GSSGSSGRKEDHARLRALNGLLYKALTDLLCTPEVSQELYDLNVELSKVSLTPDFSACRAYW---KTTLSAEQNAHMEAVLQRSAAHMRHLLMSQQTLRNVPPIVFVQDKGNAALAELDQLLAVADSGPSSG
General information:
TITO was launched using:
RESULT:
Template:
2E7G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64646 for 636 contacts (-101.6/contact) +
2D Compatibility (PS) -11525 + (NN) 1319 + (LL) 340
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -80412.0 ( -126.43 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_2E7G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E7G-query.scw
PDB file :
Tito_Scwrl_2E7G.pdb
: