Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MITYDLIGNTPLVLLEHYSDDKVKIYAKLEQWNPGGSVKDRLGKYLVEKAIQEGRVRAGQTIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMIALGADVSRTSQSEGMHGAQLAARSYAEKY--GAVYMNQFESEHNPDTYFHTLGPELTSALQ-QIDYFVAGIGSGGTFTGTARYLKQHH----VQCYAVEPEGSVLNGGPAH-------AHDTEGIGSEKWPIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNLKAQLSE--GTIVVVFPDGSDRYMSKQIFNYEENDYE |
| 1OAS Chain:A ((1-315)) | SKIYEDNSLTIGHTPLVRLNRIGNGR--ILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95225 for 2667 contacts (-35.7/contact) +
2D Compatibility (PS) -31676 + (NN) -4878 + (LL) 296
1D Compatibility (HY) -16800 + (ID) 5200
Total energy: -153483.0 ( -57.55 by residue)
QMean score : 0.394
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