Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAVKVERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYKR-DGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEG-EGQSLYIRPFVFATEGALGVGASHQYKLLIILSPSGAYYGGETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKY--IEEVGSMNIFFVE-NG-KVITPELNGSILPGITRKSIIELAK-NLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDR-EIVINNNETGEITQKLYDVYTGIQNGTLEDKNGWRVVVPKY |
| 3UZO Chain:A ((26-358)) | ------------------WSTLGFSYIRTDLRYLAHWKD-GEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKGG-LTPTNFITSD-YDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPA--THTTIEEAGAANFFAITQDGQKFVTPQS-PSILPSITKYSLLWLAEHRLGLEVEEGDIRIDELGK------FSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVTRRLYDELVGIQYGDKEAPEGWIVKV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154460 for 2756 contacts (-56.0/contact) +
2D Compatibility (PS) -35329 + (NN) -8335 + (LL) 1780
1D Compatibility (HY) -26000 + (ID) 6400
Total energy: -228744.0 ( -83.00 by residue)
QMean score : 0.504
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