Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFDYEDIQLIPNKCIVESRSECDTTIQFGPKKFKLPVVPANMQTVMNEKLAKWFAENDYFYIMHR-FDEEARIPFIKHMQNS-GL-------------FASISVG--VKKAEFDFIEKLAQEKLIPEYITIDIAHGHSDSVINMIKHIKNHIPDSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAARK---PLIADGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKEY--FGSASEFQKGEHKNV---EGKKMFVEHKGSLMDTLKEMQQDLQSSISYAGGKDLKSLRTVDYVIVRNSIFNGDRD |
| 4R7J Chain:A ((9-350)) | -RALTFEDVLLRPGYSEVLPKEVKIHTKLTKNITLNMPLISAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSE--KKRKEYPDANKDNFGRLRVGAAIGVGQMDRVDALVEAGV--DVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLIAGNIATAAAAKALCEAGVDAVKVGIGPGSICTTRIVSGVGV--PQISAIDECVEEANKFGVPVIADGGIKYSGDIAKALAVGASSVMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSLGAMQK------LVPEGIEGRVPYVGSIRSVVHQLLGGLRSSMGYVGAKDIEDFQ----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130005 for 2626 contacts (-49.5/contact) +
2D Compatibility (PS) -31903 + (NN) -7712 + (LL) 956
1D Compatibility (HY) -20400 + (ID) 5400
Total energy: -194464.0 ( -74.05 by residue)
QMean score : 0.480
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