Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
1T0A Chain:A ((2-158))
KIRIGHGFDVHKFGEPRPLILCGVEVPYETGLVAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDAAYKGADSRVLLRHCYALAKAKGFELGNLDVTIIAQAPKMAPHIEDMRQVLAADLNADVADINVKATTTEKLGFTGRKEGIAVEAVVLLSR
General information:
TITO was launched using:
RESULT:
Template:
1T0A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108113 for 1323 contacts (-81.7/contact) +
2D Compatibility (PS) -17224 + (NN) -9753 + (LL) 0
1D Compatibility (HY) -14400 + (ID) 4800
Total energy: -154290.0 ( -116.62 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_1T0A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T0A-query.scw
PDB file :
Tito_Scwrl_1T0A.pdb
: