Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEHQKRSPFPKDFLWGSASAAYQIEGAWDADGKGKSVWDEYVRIPGTT--FKGTNGDVAVDHYHRYKEDVKLMADAGLKAYRFSIAWTRIFPNGK--GEVNEAGLQFYDNLIDELLKYDIEPLVTLYHWDIPQALFDEYGGWESRQVIEDFTNYSTTLFKRYGDRVKYWVSLNEQNIFVGMGYGQALHPPKVSDP------------KRMYAVNHIANLANASVIKAFHEIV--PDGKIGPSFAYTPHYPIDTD-PKNVQAADDAEELNSYFWMDMYAFGRYPKAVWKYLEENDIAPVIEDGDMELLASAKPDFMGVNYYQSATVAYNPLDGVGQNNEMNFTGKKGSTKETGVPGVYK--------KVVNPFVKTTNWDWTIDPKGLQIALRRINSRYA-LPILITENGLGEFDKLV-DGEVNDDYRIDYLSAHATAIRDAI-SDGVDMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDVEDDAPMTRIPKKSYYWYKQVIETNGADL |
1E4M Chain:M ((18-500)) | -DALNSSSFSSDFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTHQGGKIGPTMITRWFLPYNDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVG--ERLPSFSPEESNLVKGS-YDFLGLNYYFTQYAQPSPNPVNST---NHTA----MMD-AGAKLTYINASGHYIGPLFEKDKADSTDNIYYYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDENRNQSMLDYTRIDYLCSHLCFLNKVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNN---V-TDRDLKKSGQWYQSFIS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211637 for 4066 contacts (-52.1/contact) +
2D Compatibility (PS) -47909 + (NN) -14733 + (LL) -24
1D Compatibility (HY) -28800 + (ID) 7100
Total energy: -310203.0 ( -76.29 by residue)
QMean score : 0.504
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