Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRFDNVSKKYSDDKTAAVNNVTLDIKDGEFFVFIGPSGCGKTTTLKMINRLIPLTTGTIYINEKRISDYDIHELRW----DIGYVLQQIALFPHMTIEENIAIVPELKKWS-KEKIHDRITELLDSVGLDPESYRHRKPAELSGGEQQRVGVVRALAADPGIILMDEPFSALDPISRQRLQQDISALQKKIKKTIVFVTHDMQEALALGDRICVMQGGEIVQVATPQEIMKNPENDFVKDFLASGHAFNTPILEANFTVNDLIEADLFYSYQTSDGTLGISSTEPVENLVRRIAEEQSIPVTDEAGNYIGTVSNKHVMQFLARHLESSGELV |
| 2PCL Chain:A ((20-218)) | ------------------LKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENV-IVPMLKMGKPKKEAKERGEYLLSELGLGDKL--SRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRV-MDIFLKINEGGTSIVMVTHE-RELAELTHRTLEMKDGKVV--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PCL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91347 for 1488 contacts (-61.4/contact) +
2D Compatibility (PS) -21556 + (NN) -11279 + (LL) 8840
1D Compatibility (HY) -12800 + (ID) 3750
Total energy: -131892.0 ( -88.64 by residue)
QMean score : 0.518
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