Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLGKVITAMVTPIHPEKDKVCKKRIHHLVNHLIKNGSDGLVIAGTTGESPTLSHDEKIKLFRQVIETNDGRAKLIAGTGSNNTAETIAFTKEVATLGGMDAVLIVAPYYNKPNQDGLYAHFAAVAEA-SDLPVVIYNIPGRSVVNIEPETIIRLAKLPNIVGVKESSGNLDNISKIIAETSDDFQVYSGDDSLTLPILAVGGNGVISVASHIVGNEMQEMIQAFERGEVQKAAQIHRELLPLMNGLFSVPNPAPTKYLLNQQG-ISVGPVRLPLVDLNAEQGTKLQAILEGLSK- |
| 1DHP Chain:A ((1-292)) | -MFTGSIVAIVTPMDEK-GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSG-IVGCLTVTPYYNRPSQEGLYQHFKAIAEHTD-LPQILYNVPSRTGCDLLPETVGRLAKVKNIIGIKEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITDSGRETVRAALKHAGLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DHP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158438 for 2585 contacts (-61.3/contact) +
2D Compatibility (PS) -32090 + (NN) -19679 + (LL) 24
1D Compatibility (HY) -22800 + (ID) 5600
Total energy: -238583.0 ( -92.30 by residue)
QMean score : 0.579
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