Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERNEVLKKVEAAMPNARFKHTLGVEKAAVELAEHYHMDVEKARITALLHDYAKYYDDDKARKIIEDEGYD-PRLLSFHHSLWHAPVGAYLAEKEF-GI-TDTEILEAIRLHTTGSATMSDFDKLIYLADYTEQGRTFPGVYKARRLALKSLDEAMLFALSNTITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY
3CCG Chain:A ((3-189))
WSYDKITDYLMNNLGEKRYKHSLGVMDTAVRLAGIYNEDTEKARIAGLVHDCAKKLPGEKIIEICTNEGYELGDEDIRNSYLLHGLAGRILAKK-VIGIDD-EDVLNAIEFHTTGRPNMSLLEKIIYIADYIEPGREFKGVDELRKAADEDLNKALLMSFDNTIKFVIDKGGFLHHNTIEARNYLISRK-----
General information:
TITO was launched using:
RESULT:
Template:
3CCG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87895 for 1453 contacts (-60.5/contact) +
2D Compatibility (PS) -19637 + (NN) -8682 + (LL) 152
1D Compatibility (HY) -14800 + (ID) 3450
Total energy: -134312.0 ( -92.44 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_3CCG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CCG-query.scw
PDB file :
Tito_Scwrl_3CCG.pdb
: