Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILLIGASGTLGSAVKDRLEK-KAEVITAGRHSG-------------DVTVDITSIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKL-----------ESFFQGFVPVPAAKVARAFEKSVFGA---QTGESYKVY |
| 3D3W Chain:A ((8-238)) | RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75365 for 1661 contacts (-45.4/contact) +
2D Compatibility (PS) -20847 + (NN) -2814 + (LL) 0
1D Compatibility (HY) -9200 + (ID) 2150
Total energy: -110376.0 ( -66.45 by residue)
QMean score : 0.444
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