Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTEKSVYTILRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDALMRLDLPSGVDIEIKL
2MEW Chain:A ((2-82))
MGGQKIRIKLKAYDHELLDESAKKIVEVAKSTNSKVSGPIPLPT---------------------ESRVHKRLIDIIDPSPKTIDALMRINLPAGVDVEIKL
General information:
TITO was launched using:
RESULT:
Template:
2MEW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24449 for 535 contacts (-45.7/contact) +
2D Compatibility (PS) -8916 + (NN) -1900 + (LL) 1908
1D Compatibility (HY) -9600 + (ID) 2850
Total energy: -45807.0 ( -85.62 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_2MEW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MEW-query.scw
PDB file :
Tito_Scwrl_2MEW.pdb
: