Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MSKKTIAVIGSGAAALSLAAAFPPSYEVTVITKKSVKNSNSVYAQGGIAAAYAKDDSIEAHLEDTLYAGCGHNNLAIVADVLHDGKMMVQSLLERGFPFDRNERGGVCLGREGAHSYNRIFHAGGDATGRLLIDYLLKRIN--SKIKLIENETAADLLIE--------DGRCIGVMTKD-SKGRLKVRHADEVVLAAGGCGNLFLHHTNDLTVTGDGLSLAYRAGAELTDLEFTQFHPTLLVKNGVSYGLVSEAVRGEGGCLVDENGRRIMAERHPLGDLAPRDIVSRVIHEEMAKGN--RVYIDFSAI--SDFETRFPTITAICEKA-GIDIHSGKIPVAPGMHFLMGGVSVNRWGETTVPGLYAIGETACSGLHGANRLASNSLLEALVFGKRAAEHIIQK-------PVYNRQYQSGLETSVFYEVPDIEG------HELQSKMTSHMSILREQSSLIELSIWLHTLPFQEVNVK---DITIRQMELSHLWQTAKLMTFSALLREESRGAHFRTDFPHAE---VSWQGRQIVHTKKGTKIRKNEGIWNNESFTAEKITESLFS
1CHU Chain:A ((2-533))NTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEFDE-------------TDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVL-----------------------------------TTLVSKALNHPNIRVLERTNAVDLIV-SDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLG-LGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMHDISTLPPWDESRVEN-----PDERV----VIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLD--YPELLT--HSGPSILSP-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 1CHU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2444 -18614 -7.62 -42.40
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -7.62
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_1CHU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CHU-query.scw
PDB file : Tito_Scwrl_1CHU.pdb: